Bioinformatics- Assignment 7| CollecTF Database
The three different species of bacteria:
- Firmicutes
- Clostridia
- Clostridiales
Ecosystem details:
Digestive system -> Large intestine -> Fecal
Transcription factor, CsoR.
Motif
- Inverted repeat
G/C content
- 69.23%
Regulatory mode
- Activation 0%, Repression 100%, Dual 0%, Not specified 0%.
TF conformation
- Monomer 0%, Dimer 0%, Tetramer 100%, Other 0%, Not specified 0%.
Binding site type
- Motif-associated 1, Variable-motif-associated 0, Non-motif-associated 0.
The specific type of gene regulation this transcription factor is involved in I couldn't determine. However, I'm inclined to say, TTHA.
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